Journal of Systematics and Evolution

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  • 收稿日期:2025-12-13 接受日期:2026-04-23

Genetic, phenotypic, and ecological differentiation indicate a new cryptic and threatened species in the orchid genus Epidendrum from Alcatrazes Island, southeastern Brazil

Beatriz L. Arida1†, Giovana N. Trotta1†, Beatriz C. De Marco1†, Iris D. P. Ribeiro1†, Raphael da Silva1, Thales M. de Lima1, Welington L. Sachetti Junior1, Vitor de A. Kamimura1, Gabriel P. Sabino1, Bárbara S. S. Leal1,2, Lívia Garcia1, Edlley M. Pessoa3*, and Fabio Pinheiro1*   

  1. 1Departamento de Biologia Vegetal, Instituto de Biologia, Universidade Estadual de Campinas (UNICAMP), Campinas, São Paulo 13083-862, Brazil
    2Instituto Tecnológico Vale (ITV), Belém, Pará 66055-090, Brazil
    3Centro de Ciências Naturais e Humanas, Bangu, Universidade Federal do ABC, Santo André, São Paulo 09280-560, Brazil
    These authors contributed equally to this work.
    *Authors for correspondence. Fabio Pinheiro. E-mail: biopin@unicamp.br; Edlley M. Pessoa. E-mail: edlley.pessoa@ufabc.edu.br
  • Received:2025-12-13 Accepted:2026-04-23
  • Supported by:
    Support for this work was provided by the Funda??o de Amparo à Pesquisa do Estado de S?o Paulo (FAPESP; grant no. 2022/ 02667-1). Additional funds were provided by grants from FAEPEX (FUNCAMP) and Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq productivity grant no. 303432/2024-1) to FP, and fellowships from FAPESP to GNT (grant no. 2022/07784-6), BCMP (grant no. 2022/09026-1), and IDPR (grant no. 2022/08912-8). This study was also financed in part by the Coordena??o de Aperfei?oamento de Pessoal de Nível Superior-Brasil (CAPES)-Finance Code 001. The Article Processing Charge for the publication of this research was funded by the Coordena??o de Aperfei?oamento de Pessoal de Nível Superior-Brasil (CAPES) (ROR identifier: 00x0ma614).

Abstract: Islands are natural laboratories for studying speciation, where geographic isolation can promote rapid diversification. This study investigates the divergence of an insular population of the orchid Epidendrum fulgens on Alcatrazes Island, a land-bridge island off the Brazilian coast. Using an integrative approach, we combined genomic (nuclear and plastid microsatellites), phenotypic (leaf functional traits and floral morphometrics), and ecological (plant community structure and diversity) analyses to test for differentiation from mainland populations. Our results revealed significant genetic divergence, with the island population exhibiting exclusive plastid haplotypes and a distinct genetic cluster, indicating prolonged reproductive isolation despite historical land connections. Phenotypically, insular plants consistently displayed succulent leaves and smaller flowers, traits suggestive of local adaptation to drier conditions and a distinct pollinator regime. Although community-level analyses revealed similar species and phylogenetic diversity, the insular community differed compositionally and exhibited a distinct phylogenetic structure. The confluence of genetic distinctness, adaptive phenotypic traits, and ecological isolation satisfies multiple species criteria, leading us to describe the Alcatrazes population as a new cryptic species. This finding underscores the role of land-bridge islands as engines of speciation, even for species with high dispersal potential, and highlights the critical importance of integrative taxonomy for identifying evolutionarily significant units and informing conservation efforts for insular endemics.

Key words: cryptic species, Epidendrum fulgens, Epidendrum insulare, land-bridge island, speciation