J Syst Evol

• Research Article • Previous Articles    

Genomic vulnerability and local adaptation of an arid tolerant tree species on the Qinghai-Tibet Plateau

Jieshi Tang1,2,†, Markus Ruhsam3,†, Shuo Feng4,†, Richard Milne5, Heng Yang1, Jingge Kuang1, Wenjing Tao1, Yi Wang1, Jialiang Li1, Zulfiyor Bakhtiyorov6,7,8, Rahmonov Oimahmad9, Kangshan Mao1,10*   

  1. 1Key Laboratory for Bio-Resources and Eco-Environment of Ministry of Education, College of Life Sciences, State Key Laboratory of Hydraulics and Mountain River Engineering, Sichuan University, Chengdu, China
    2Key Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural Affairs, Chengdu, China
    3Royal Botanic Garden Edinburgh, 20A Inverleith Row, Edinburgh, EH3 5LR, UK
    4State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining, China
    5Institute of Molecular Plant Sciences, University of Edinburgh, Edinburgh, UK
    6Tree Ring Unit, Department of Geography, University of Cambridge, Cambridge, CB2 3EN, United Kingdom
    7State Key Laboratory of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi 830011, China
    8Khujand Science Center, National Academy of Sciences of the Republic of Tajikistan, Tajikistan
    9Faculty of Natural Sciences, Institute of Earth Sciences, University of Silesia in Katowice, Katowice, Poland
    10College of Science, Tibet University, Lhasa, China

    Jieshi Tang, Markus Ruhsam, and Shuo Feng contributed equally.
    *For correspondence: Kangshan Mao (maokangshan@scu.edu.cn).
  • Received:2024-11-08 Accepted:2025-03-09
  • Supported by:
    This work was financially supported by the Central Government Guides Local Science and Technology Development Fund Projects for Qinghai Province (Grant/Award Number: 2024ZY005) and National Natural Science Foundation of China (Grant/Award Number: 42371059).

Abstract: Coping with increasing global temperatures due to climate change may be especially challenging for trees with long generation times as changes might happen too quickly for successful adaptation. Juniperus przewalskii is an arid tolerant key species of forest ecosystems on the northeastern Qinghai-Tibet Plateau. Target capture sequencing was utilized to survey genetic variation and population structure, and to infer the evolutionary history of this species by analyzing 170 individuals from 23 populations. This approach provided valuable information on how local adaptation influences the genetic background of this species, as well as potential predictions regarding the species' response to global climate change. Our results revealed a new fine-scale genetic structure and high levels of genetic diversity as well as local adaptations despite gene flow. Redundancy analysis showed that climate contributed the most to the genetic variation of J. przewalskii. Analysis of gradient forest and risk of non-adaptedness indicated that, for the variables examined and the majority of locations sampled, it is improbable that J. przewalskii will need significant alterations in allele frequencies to endure the forecasted climate shifts. We also identified the most at-risk populations for preservation and numerous candidate genes that may be valuable for upcoming climate change. The significance of combining genetic and environmental information to forecast the resilience of a key tree species to global warming is underscored in our results, particularly in areas susceptible to climate fluctuations.

Key words: climate change, genomic vulnerability, Juniperus przewalskii, local adaptation, Qinghai-Tibet Plateau, risk of non-adaptedness